The movie begins with Fuyuki Hinata and the Keroro Platoon exploring an abandoned temple in the mountaintop city of Machu Picchu in Peru. While on the exploration, Keroro accidentally sets off a trap, and by chance they find a hidden chamber with a large blue crystal in the center, on a stand that has a key in it. Keroro leans on the key, causing the room to activate a mysterious machine, this caused the entire temple to shake. As soon as the group realized what was happening, they run out of the room. While running, Keroro accidentally loses his Kero Ball while Fuyuki catches a fleeting glimpse of a glowing young woman as he is running out, and tells Keroro that there was a girl in the room, but he is forced to leave the room before he can say anything else. The group successfully escapes, while the girl (now sprouting a pair of glowing wings) watches them leave - while back in the chamber, something is growing within the crystal...

This is the condensed theatrical adaptation of the original TV series' first season.

After winning domestic preliminary round, Lisa, Lorna, and Soichi advance to ex-Driver world race competition held in Los Angeles as representative team from Japan. Like a bad omen, they encountered a reckless AI car the first night they arrived at Los Angeles. Although they successfully stopped the car, the local police department is not very happy about that and insists to examine their car overnight. However, the problem did not stop just there. The daughter of the United States team`s sponsor, Angela, has gone missing. Lorna realized that Angela was on the reckless AI car before. Soichi who guessed that Angel could be in danger then start looking for her. But Soichi got captured by a mysterious man, and he shocked to find Angela is also there. During the confinement inside a warehouse, Soichi finds out that apparently there is a connection between the series of incident and illegal gambling on the ex-Driver world race competition. Now Soichi must escape from the warehouse with Angela....

After losing almost all their members the Tobita Crush Gear club is facing extinction. Kouya who dreams of being a Crush Gear Fighting Champion doesn't want to see the club become extinct and will do whatever he can to keep the club running and become a Cush Gear Champion.